Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 AC025884.2-201ENST00000553429 711 ntBASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRBV27A0A0K0K1C4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 C9orf163-202ENST00000624034 2573 ntBASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV27A0A0K0K1C4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV27A0A0K0K1C4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV27A0A0K0K1C4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 AL117328.2-201ENST00000624617 1940 ntBASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV27A0A0K0K1C4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 AL157400.5-201ENST00000507624 621 ntBASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV27A0A0K0K1C4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 CR559946.2-201ENST00000623684 991 ntBASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV27A0A0K0K1C4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV27A0A0K0K1C4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms