Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.41■■□□□ 1.34
CCDC163A0A0D9SF12 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC163A0A0D9SF12 MIR6821-201ENST00000617625 74 ntBASIC23.41■■□□□ 1.34
CCDC163A0A0D9SF12 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC163A0A0D9SF12 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC163A0A0D9SF12 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC163A0A0D9SF12 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
CCDC163A0A0D9SF12 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.4■■□□□ 1.34
CCDC163A0A0D9SF12 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.39■■□□□ 1.34
CCDC163A0A0D9SF12 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
CCDC163A0A0D9SF12 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 AC004448.1-201ENST00000458332 883 ntBASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 AC091305.1-201ENST00000479476 895 ntBASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 AF213884.3-201ENST00000563833 479 ntBASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 AC092171.4-201ENST00000609130 632 ntBASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.39■■□□□ 1.33
CCDC163A0A0D9SF12 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC163A0A0D9SF12 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC163A0A0D9SF12 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.37■■□□□ 1.33
CCDC163A0A0D9SF12 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 AC097381.1-201ENST00000429019 1296 ntBASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 AP001330.3-201ENST00000520123 633 ntBASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC163A0A0D9SF12 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.35■■□□□ 1.33
CCDC163A0A0D9SF12 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.34■■□□□ 1.33
CCDC163A0A0D9SF12 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC163A0A0D9SF12 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.33■■□□□ 1.33
CCDC163A0A0D9SF12 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CCDC163A0A0D9SF12 AC005703.6-201ENST00000623265 1329 ntBASIC23.33■■□□□ 1.32
CCDC163A0A0D9SF12 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC163A0A0D9SF12 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC163A0A0D9SF12 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC163A0A0D9SF12 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC163A0A0D9SF12 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CCDC163A0A0D9SF12 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 SYT6-210ENST00000641643 1587 ntBASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC163A0A0D9SF12 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.3■■□□□ 1.32
CCDC163A0A0D9SF12 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC163A0A0D9SF12 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC163A0A0D9SF12 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.3■■□□□ 1.32
CCDC163A0A0D9SF12 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CCDC163A0A0D9SF12 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC163A0A0D9SF12 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC163A0A0D9SF12 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC163A0A0D9SF12 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
CCDC163A0A0D9SF12 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC163A0A0D9SF12 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC163A0A0D9SF12 RASA4CP-201ENST00000424092 1398 ntBASIC23.28■■□□□ 1.32
CCDC163A0A0D9SF12 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC163A0A0D9SF12 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CCDC163A0A0D9SF12 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC163A0A0D9SF12 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC163A0A0D9SF12 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms