Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.9■□□□□ 0.94
TRGV8A0A0C4DH27 AC090877.2-201ENST00000558441 1738 ntBASIC20.9■□□□□ 0.94
TRGV8A0A0C4DH27 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRGV8A0A0C4DH27 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRGV8A0A0C4DH27 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRGV8A0A0C4DH27 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 AL136162.1-201ENST00000607711 1078 ntBASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV8A0A0C4DH27 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 SRD5A1P1-201ENST00000442297 786 ntBASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRGV8A0A0C4DH27 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV8A0A0C4DH27 RARRES2P6-201ENST00000567333 442 ntBASIC20.87■□□□□ 0.93
TRGV8A0A0C4DH27 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV8A0A0C4DH27 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV8A0A0C4DH27 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRGV8A0A0C4DH27 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 AC135279.3-201ENST00000610945 1311 ntBASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 AC092666.2-201ENST00000613287 246 ntBASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV8A0A0C4DH27 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.84■□□□□ 0.93
TRGV8A0A0C4DH27 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRGV8A0A0C4DH27 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV8A0A0C4DH27 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.84■□□□□ 0.93
TRGV8A0A0C4DH27 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRGV8A0A0C4DH27 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV8A0A0C4DH27 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRGV8A0A0C4DH27 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.83■□□□□ 0.93
TRGV8A0A0C4DH27 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.83■□□□□ 0.93
TRGV8A0A0C4DH27 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRGV8A0A0C4DH27 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRGV8A0A0C4DH27 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.82■□□□□ 0.92
TRGV8A0A0C4DH27 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRGV8A0A0C4DH27 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRGV8A0A0C4DH27 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRGV8A0A0C4DH27 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.81■□□□□ 0.92
TRGV8A0A0C4DH27 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRGV8A0A0C4DH27 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.8■□□□□ 0.92
TRGV8A0A0C4DH27 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
TRGV8A0A0C4DH27 AC024257.2-201ENST00000549699 147 ntBASIC20.8■□□□□ 0.92
TRGV8A0A0C4DH27 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRGV8A0A0C4DH27 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV8A0A0C4DH27 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV8A0A0C4DH27 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV8A0A0C4DH27 SUDS3P1-201ENST00000505831 966 ntBASIC20.79■□□□□ 0.92
TRGV8A0A0C4DH27 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.79■□□□□ 0.92
TRGV8A0A0C4DH27 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV8A0A0C4DH27 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 EDA-201ENST00000338901 1233 ntBASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 AL031432.3-201ENST00000607698 485 ntBASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 AL355001.2-201ENST00000620617 1191 ntBASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.78■□□□□ 0.92
TRGV8A0A0C4DH27 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms