Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HLA-L-211ENST00000482052 1765 ntBASIC18.08■□□□□ 0.48
TRAV5A0A0B4J249 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV5A0A0B4J249 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV5A0A0B4J249 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV5A0A0B4J249 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV5A0A0B4J249 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 MIR3960-201ENST00000583311 91 ntBASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 AC016575.1-201ENST00000607026 382 ntBASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV5A0A0B4J249 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV5A0A0B4J249 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 SMPD5-203ENST00000639008 1464 ntBASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV5A0A0B4J249 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 ABHD17AP4-201ENST00000411545 909 ntBASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV5A0A0B4J249 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 AC060814.1-201ENST00000554326 538 ntBASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV5A0A0B4J249 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV5A0A0B4J249 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV5A0A0B4J249 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV5A0A0B4J249 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV5A0A0B4J249 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV5A0A0B4J249 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV5A0A0B4J249 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV5A0A0B4J249 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV5A0A0B4J249 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV5A0A0B4J249 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV5A0A0B4J249 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms