Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 AC068473.5-201ENST00000616428 2072 ntBASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ABHD17AP5-201ENST00000580133 923 ntBASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 AC093536.1-201ENST00000569153 554 ntBASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 AC097639.1-201ENST00000565519 1891 ntBASIC16.33■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 AC133552.2-201ENST00000619106 1032 ntBASIC16.32■□□□□ 0.2
TRAV8-3A0A0A6YYJ7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms