Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RNF126P1-201ENST00000567452 1320 ntBASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 CLDN5-201ENST00000403084 2357 ntBASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV30A0A087WSZ9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV30A0A087WSZ9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV30A0A087WSZ9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV30A0A087WSZ9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV30A0A087WSZ9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAV30A0A087WSZ9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAV30A0A087WSZ9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV30A0A087WSZ9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 AC009831.1-201ENST00000580420 1582 ntBASIC18.21■□□□□ 0.51
TRAV30A0A087WSZ9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
TRAV30A0A087WSZ9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV30A0A087WSZ9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 AC018755.3-202ENST00000596210 929 ntBASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV30A0A087WSZ9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 AC133561.1-201ENST00000568600 2415 ntBASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV30A0A087WSZ9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV30A0A087WSZ9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV30A0A087WSZ9 AC012676.1-201ENST00000574705 1949 ntBASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV30A0A087WSZ9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms