Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV23DV6A0A075B6W5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV23DV6A0A075B6W5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV23DV6A0A075B6W5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV23DV6A0A075B6W5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV23DV6A0A075B6W5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV23DV6A0A075B6W5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRAV23DV6A0A075B6W5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV23DV6A0A075B6W5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV23DV6A0A075B6W5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV23DV6A0A075B6W5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV23DV6A0A075B6W5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV23DV6A0A075B6W5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV23DV6A0A075B6W5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV23DV6A0A075B6W5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV23DV6A0A075B6W5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 LINC01971-201ENST00000617888 1048 ntBASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV23DV6A0A075B6W5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV23DV6A0A075B6W5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L13-201ENST00000554103 1267 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L15-201ENST00000611059 1267 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L23-201ENST00000615195 1269 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L24-201ENST00000617576 1269 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L22-201ENST00000618238 1269 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L20-201ENST00000619712 1269 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L21-201ENST00000622058 1269 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L10-201ENST00000622460 1267 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 DUX4L25-201ENST00000624915 1269 ntBASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV23DV6A0A075B6W5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 AC126177.7-201ENST00000547904 679 ntBASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV23DV6A0A075B6W5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV23DV6A0A075B6W5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV23DV6A0A075B6W5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV23DV6A0A075B6W5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms