Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 RPL13P2-201ENST00000440687 659 ntBASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 KRT18P64-201ENST00000434946 1219 ntBASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 SPDYE18-201ENST00000510091 1050 ntBASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 SLED1-202ENST00000512051 380 ntBASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAI2Q9Y5P3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 TIMM17BP1-201ENST00000545713 516 ntBASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms