Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 PCDH8P1-201ENST00000428983 2773 ntBASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 AC007389.4-201ENST00000454674 793 ntBASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 RPL13AP25-201ENST00000484130 612 ntBASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 AL133267.1-201ENST00000398220 340 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 AL162726.2-201ENST00000438986 1017 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 GPR53P-205ENST00000457298 1084 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 AL049840.4-201ENST00000602422 811 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 AC133539.2-201ENST00000604757 467 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 RPSAP52-203ENST00000622976 1023 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 INTS4P2-202ENST00000614726 2019 ntBASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLCF1Q9UBD9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms