Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 CROT-203ENST00000419147 2959 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 TK1-204ENST00000590430 683 ntTSL 3 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 PER1-202ENST00000354903 3115 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 Z98257.2-202ENST00000641138 1548 ntBASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms