Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 MYO15B-237ENST00000642007 4893 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 AC073508.3-201ENST00000619697 1419 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LITAFQ99732 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LITAFQ99732 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LITAFQ99732 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 AL122018.1-201ENST00000446607 2310 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LITAFQ99732 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 AC113347.1-201ENST00000413321 391 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 AL671277.2-201ENST00000458060 996 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 NKAPP1-205ENST00000585790 367 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 AC011467.4-201ENST00000594891 528 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 AL031055.1-201ENST00000606362 631 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 AP001269.4-201ENST00000609611 512 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LITAFQ99732 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.49□□□□□ -0.73
LITAFQ99732 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LITAFQ99732 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.49□□□□□ -0.73
LITAFQ99732 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.49□□□□□ -0.73
LITAFQ99732 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LITAFQ99732 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.49□□□□□ -0.73
LITAFQ99732 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LITAFQ99732 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LITAFQ99732 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms