Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
MUC4Q99102 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.57□□□□□ -0.56
MUC4Q99102 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
MUC4Q99102 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.57□□□□□ -0.56
MUC4Q99102 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.57□□□□□ -0.56
MUC4Q99102 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 TIMM8BP1-201ENST00000452384 211 ntBASIC11.57□□□□□ -0.56
MUC4Q99102 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.57□□□□□ -0.56
MUC4Q99102 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.57□□□□□ -0.56
MUC4Q99102 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.57□□□□□ -0.56
MUC4Q99102 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.57□□□□□ -0.56
MUC4Q99102 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.57□□□□□ -0.56
MUC4Q99102 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.57□□□□□ -0.56
MUC4Q99102 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.57□□□□□ -0.56
MUC4Q99102 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.57□□□□□ -0.56
MUC4Q99102 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MUC4Q99102 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 FAM45BP-202ENST00000592932 1624 ntBASIC11.56□□□□□ -0.56
MUC4Q99102 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 AGAP7P-201ENST00000582299 2062 ntBASIC11.56□□□□□ -0.56
MUC4Q99102 AGAP14-201ENST00000624701 2060 ntBASIC11.56□□□□□ -0.56
MUC4Q99102 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.56□□□□□ -0.56
MUC4Q99102 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
MUC4Q99102 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.56□□□□□ -0.56
MUC4Q99102 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 AC243562.1-201ENST00000560672 389 ntBASIC11.56□□□□□ -0.56
MUC4Q99102 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 SPTSSB-204ENST00000617024 1292 ntBASIC11.56□□□□□ -0.56
MUC4Q99102 AC008267.7-201ENST00000624570 1194 ntBASIC11.56□□□□□ -0.56
MUC4Q99102 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
MUC4Q99102 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MUC4Q99102 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.56□□□□□ -0.56
MUC4Q99102 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.56□□□□□ -0.56
MUC4Q99102 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
MUC4Q99102 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MUC4Q99102 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MUC4Q99102 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MUC4Q99102 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.55□□□□□ -0.56
MUC4Q99102 AP000344.2-201ENST00000512987 629 ntBASIC11.55□□□□□ -0.56
MUC4Q99102 KRT8P48-201ENST00000515599 1220 ntBASIC11.55□□□□□ -0.56
MUC4Q99102 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.55□□□□□ -0.56
MUC4Q99102 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.55□□□□□ -0.56
MUC4Q99102 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.55□□□□□ -0.56
MUC4Q99102 MIR4469-201ENST00000583919 79 ntBASIC11.55□□□□□ -0.56
MUC4Q99102 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.55□□□□□ -0.56
MUC4Q99102 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.55□□□□□ -0.56
MUC4Q99102 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms