Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 KRT8P35-201ENST00000483942 1338 ntBASIC16.83■□□□□ 0.28
YME1L1Q96TA2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 AL021578.1-201ENST00000613646 709 ntBASIC16.83■□□□□ 0.28
YME1L1Q96TA2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
YME1L1Q96TA2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 ELK2AP-201ENST00000392510 1007 ntBASIC16.82■□□□□ 0.28
YME1L1Q96TA2 AL133267.1-201ENST00000398220 340 ntBASIC16.82■□□□□ 0.28
YME1L1Q96TA2 MTX1P1-201ENST00000440904 838 ntBASIC16.82■□□□□ 0.28
YME1L1Q96TA2 AL591846.1-201ENST00000451736 433 ntBASIC16.82■□□□□ 0.28
YME1L1Q96TA2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
YME1L1Q96TA2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 MIR1202-201ENST00000408529 83 ntBASIC16.81■□□□□ 0.28
YME1L1Q96TA2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 RNA5SP423-201ENST00000517127 109 ntBASIC16.81■□□□□ 0.28
YME1L1Q96TA2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.81■□□□□ 0.28
YME1L1Q96TA2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms