Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 DUX4L27-201ENST00000554796 1261 ntBASIC18.65■□□□□ 0.58
NEK1Q96PY6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 AC092364.2-202ENST00000597012 1073 ntBASIC18.65■□□□□ 0.58
NEK1Q96PY6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 AC087499.5-201ENST00000452760 1342 ntBASIC18.65■□□□□ 0.58
NEK1Q96PY6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
NEK1Q96PY6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NEK1Q96PY6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NEK1Q96PY6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.64■□□□□ 0.58
NEK1Q96PY6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NEK1Q96PY6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AL590560.3-201ENST00000623350 461 ntBASIC18.64■□□□□ 0.57
NEK1Q96PY6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AC100757.3-201ENST00000622361 1406 ntBASIC18.64■□□□□ 0.57
NEK1Q96PY6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 AC006486.2-201ENST00000624246 2199 ntBASIC18.64■□□□□ 0.57
NEK1Q96PY6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEK1Q96PY6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 KRT18P64-201ENST00000434946 1219 ntBASIC18.63■□□□□ 0.57
NEK1Q96PY6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 AL844908.2-201ENST00000609461 460 ntBASIC18.63■□□□□ 0.57
NEK1Q96PY6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 AF228730.6-201ENST00000641497 218 ntBASIC18.63■□□□□ 0.57
NEK1Q96PY6 AC084121.3-201ENST00000641716 218 ntBASIC18.63■□□□□ 0.57
NEK1Q96PY6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK1Q96PY6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NEK1Q96PY6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 DBET-201ENST00000630918 3363 ntBASIC18.62■□□□□ 0.57
NEK1Q96PY6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms