Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 AL137784.3-201ENST00000623858 2288 ntBASIC13.6□□□□□ -0.23
CMTM3Q96MX0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.6□□□□□ -0.23
CMTM3Q96MX0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.59□□□□□ -0.23
CMTM3Q96MX0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 CXCL1P1-201ENST00000502804 216 ntBASIC13.59□□□□□ -0.23
CMTM3Q96MX0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 AC024267.1-201ENST00000582320 895 ntBASIC13.59□□□□□ -0.23
CMTM3Q96MX0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 AL450472.2-201ENST00000603663 1156 ntBASIC13.59□□□□□ -0.23
CMTM3Q96MX0 NPAP1P7-201ENST00000613027 823 ntBASIC13.59□□□□□ -0.23
CMTM3Q96MX0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 AC005840.4-201ENST00000541242 2494 ntBASIC13.59□□□□□ -0.23
CMTM3Q96MX0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.59□□□□□ -0.23
CMTM3Q96MX0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.58□□□□□ -0.23
CMTM3Q96MX0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CMTM3Q96MX0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CMTM3Q96MX0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.58□□□□□ -0.23
CMTM3Q96MX0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms