Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AC243562.2-201ENST00000561247 970 ntBASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AC009407.1-201ENST00000568958 598 ntBASIC18.31■□□□□ 0.52
PGBD1Q96JS3 MIR4313-201ENST00000580760 101 ntBASIC18.31■□□□□ 0.52
PGBD1Q96JS3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AC008738.7-201ENST00000609744 511 ntBASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PGBD1Q96JS3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.3■□□□□ 0.52
PGBD1Q96JS3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.3■□□□□ 0.52
PGBD1Q96JS3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 AC044860.1-202ENST00000559481 777 ntBASIC18.3■□□□□ 0.52
PGBD1Q96JS3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 C18orf15-201ENST00000623680 2534 ntBASIC18.3■□□□□ 0.52
PGBD1Q96JS3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.3■□□□□ 0.52
PGBD1Q96JS3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 AC087499.5-201ENST00000452760 1342 ntBASIC18.29■□□□□ 0.52
PGBD1Q96JS3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 AC004987.2-201ENST00000395959 1148 ntBASIC18.29■□□□□ 0.52
PGBD1Q96JS3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 FAM8A3P-201ENST00000427218 844 ntBASIC18.29■□□□□ 0.52
PGBD1Q96JS3 AC009477.1-201ENST00000452936 217 ntBASIC18.29■□□□□ 0.52
PGBD1Q96JS3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.29■□□□□ 0.52
PGBD1Q96JS3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms