Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 HTR5BP-201ENST00000430851 1154 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 AC074386.1-202ENST00000463561 864 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 AC098859.1-201ENST00000502915 1238 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 PDPK2P-202ENST00000562415 1191 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 AC145285.3-201ENST00000564603 959 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 MIR3197-201ENST00000582241 73 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 AC140479.7-201ENST00000636301 2332 ntBASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CHAMP1Q96JM3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 RPS8P6-201ENST00000426177 609 ntBASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 AC243562.2-201ENST00000561247 970 ntBASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 AC097359.3-201ENST00000603982 1210 ntBASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 AC015656.1-201ENST00000624209 3578 ntBASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 CYP4F24P-201ENST00000586049 1580 ntBASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHAMP1Q96JM3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 AC027307.2-201ENST00000591252 911 ntBASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms