Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM11Q96F44 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.7■□□□□ 0.26
TRIM11Q96F44 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM11Q96F44 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 RPL5P21-201ENST00000404620 815 ntBASIC16.69■□□□□ 0.26
TRIM11Q96F44 AC254562.1-201ENST00000417586 456 ntBASIC16.69■□□□□ 0.26
TRIM11Q96F44 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 MTND6P24-201ENST00000440466 518 ntBASIC16.69■□□□□ 0.26
TRIM11Q96F44 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM11Q96F44 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM11Q96F44 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 HIST3H2BA-201ENST00000436555 524 ntBASIC16.68■□□□□ 0.26
TRIM11Q96F44 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM11Q96F44 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM11Q96F44 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms