Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 MTX1P1-201ENST00000440904 838 ntBASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 AC114812.1-204ENST00000449669 728 ntBASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAPGEF4Q8WZA2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 EEF1DP1-201ENST00000585891 896 ntBASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 ECM1P1-201ENST00000604092 1279 ntBASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 AC025181.2-201ENST00000606994 802 ntBASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 AL596087.1-201ENST00000400979 1969 ntBASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.44■□□□□ 0.86
RAPGEF4Q8WZA2 AD000864.1-201ENST00000624076 2295 ntBASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 CALR4P-201ENST00000431943 946 ntBASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms