Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX2-3Q8TAU0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AL355994.2-201ENST00000447882 704 ntBASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 BTNL10-201ENST00000595971 695 ntBASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 AC046158.3-201ENST00000624947 2558 ntBASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-3Q8TAU0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.52■□□□□ 0.55
NKX2-3Q8TAU0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 AL121723.1-201ENST00000445194 1519 ntBASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 RRP7BP-205ENST00000566851 833 ntBASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 AC244093.1-201ENST00000610837 814 ntBASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 AL033527.5-201ENST00000641382 801 ntBASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 AC013268.4-201ENST00000637413 2228 ntBASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms