Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AC055876.3-201ENST00000431496 288 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 CYMP-203ENST00000474680 1263 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AL512361.1-201ENST00000554200 418 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AC138649.4-201ENST00000612222 287 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AL607033.1-201ENST00000623900 1599 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.82□□□□□ -0.2
CPEB3Q8NE35 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPEB3Q8NE35 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AC136604.1-201ENST00000418535 575 ntBASIC13.81□□□□□ -0.2
CPEB3Q8NE35 SERBP1P3-201ENST00000459980 809 ntBASIC13.81□□□□□ -0.2
CPEB3Q8NE35 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 IGHV3-42-201ENST00000520410 361 ntBASIC13.81□□□□□ -0.2
CPEB3Q8NE35 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AC027796.2-201ENST00000575326 344 ntBASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 AL390955.2-201ENST00000603032 514 ntBASIC13.81□□□□□ -0.2
CPEB3Q8NE35 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.81□□□□□ -0.2
CPEB3Q8NE35 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPEB3Q8NE35 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.8□□□□□ -0.2
CPEB3Q8NE35 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CPEB3Q8NE35 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPEB3Q8NE35 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.8□□□□□ -0.2
CPEB3Q8NE35 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.8□□□□□ -0.2
CPEB3Q8NE35 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms