Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AP005482.1-201ENST00000563722 1273 ntBASIC16.04■□□□□ 0.16
CHPFQ8IZ52 AC133552.6-201ENST00000613406 534 ntBASIC16.04■□□□□ 0.16
CHPFQ8IZ52 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.04■□□□□ 0.16
CHPFQ8IZ52 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 AC006449.6-201ENST00000612330 2296 ntBASIC16.04■□□□□ 0.16
CHPFQ8IZ52 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 FLJ16779-201ENST00000612722 7638 ntBASIC16.04■□□□□ 0.16
CHPFQ8IZ52 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHPFQ8IZ52 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 CROCCP4-201ENST00000457096 498 ntBASIC16.03■□□□□ 0.16
CHPFQ8IZ52 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 RPL13AP25-201ENST00000484130 612 ntBASIC16.03■□□□□ 0.16
CHPFQ8IZ52 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 AL359711.2-201ENST00000563105 872 ntBASIC16.03■□□□□ 0.16
CHPFQ8IZ52 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 BRI3BPP1-201ENST00000594224 787 ntBASIC16.03■□□□□ 0.16
CHPFQ8IZ52 AC233724.13-201ENST00000598383 410 ntBASIC16.03■□□□□ 0.16
CHPFQ8IZ52 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.03■□□□□ 0.16
CHPFQ8IZ52 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AC018665.1-201ENST00000622927 1362 ntBASIC16.02■□□□□ 0.16
CHPFQ8IZ52 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms