Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 AC118758.2-201ENST00000614242 2813 ntBASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 AC113367.3-201ENST00000508316 1912 ntBASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD2Q8IV50 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
LYSMD2Q8IV50 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.9□□□□□ -0.19
LYSMD2Q8IV50 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
LYSMD2Q8IV50 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 IGHV3-47-201ENST00000425060 335 ntBASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 KRT17P6-201ENST00000453795 1220 ntBASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 CYP2A7P1-201ENST00000595391 815 ntBASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 Z69720.1-201ENST00000601483 472 ntBASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 AL121672.3-201ENST00000608644 468 ntBASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 AP001267.2-201ENST00000532619 2086 ntBASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD2Q8IV50 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 NUTM2HP-201ENST00000442076 2498 ntBASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 AL139385.1-201ENST00000611744 3272 ntBASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 MTHFR-210ENST00000641407 2387 ntBASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PMS2P1-201ENST00000431037 1228 ntBASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 AC022616.7-201ENST00000525383 220 ntBASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 AC091167.2-201ENST00000579581 588 ntBASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 AC114341.1-201ENST00000618070 349 ntBASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD2Q8IV50 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms