Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 MTND6P24-201ENST00000440466 518 ntBASIC14□□□□□ -0.17
RTTNQ86VV8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14□□□□□ -0.17
RTTNQ86VV8 AL133215.2-201ENST00000609242 977 ntBASIC14□□□□□ -0.17
RTTNQ86VV8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14□□□□□ -0.17
RTTNQ86VV8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14□□□□□ -0.17
RTTNQ86VV8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14□□□□□ -0.17
RTTNQ86VV8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14□□□□□ -0.17
RTTNQ86VV8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14□□□□□ -0.17
RTTNQ86VV8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14□□□□□ -0.17
RTTNQ86VV8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTTNQ86VV8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 AC134407.2-201ENST00000625089 1978 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 CNN2P2-201ENST00000443536 909 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 CNN2P3-201ENST00000450201 906 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 AL662799.1-202ENST00000614205 422 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 AL136317.3-201ENST00000618497 906 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 TSSK5P-201ENST00000423978 907 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 RNA5SP410-201ENST00000516285 106 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 AC017083.2-201ENST00000608069 979 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 MIR6080-201ENST00000617359 66 ntBASIC13.99□□□□□ -0.17
RTTNQ86VV8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RTTNQ86VV8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTTNQ86VV8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 AC105250.1-201ENST00000509378 2057 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 AL080243.2-201ENST00000418783 582 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms