Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SDHAP3-202ENST00000515467 728 ntBASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 ZNF890P-202ENST00000530367 1156 ntBASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD3Q7Z3D4 Z97205.2-201ENST00000564697 1639 ntBASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 UGT1A2P-201ENST00000454886 866 ntBASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD3Q7Z3D4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 AC092127.1-201ENST00000567093 3455 ntBASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 MIR4745-201ENST00000577608 62 ntBASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 LINC01115-203ENST00000606068 577 ntBASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 AC074044.1-201ENST00000609673 707 ntBASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 AC004840.1-201ENST00000636359 365 ntBASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms