Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 REXO1L6P-201ENST00000603433 1515 ntBASIC19.75■□□□□ 0.75
COPS6Q7L5N1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS6Q7L5N1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 CSF2RBP1-201ENST00000447905 391 ntBASIC19.74■□□□□ 0.75
COPS6Q7L5N1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPS6Q7L5N1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AC016694.1-201ENST00000434179 700 ntBASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 AL583810.1-201ENST00000553344 1045 ntBASIC19.73■□□□□ 0.75
COPS6Q7L5N1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.73■□□□□ 0.75
COPS6Q7L5N1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COPS6Q7L5N1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 AC022188.1-201ENST00000620960 1664 ntBASIC19.72■□□□□ 0.75
COPS6Q7L5N1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS6Q7L5N1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS6Q7L5N1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPS6Q7L5N1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS6Q7L5N1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms