Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC8.59□□□□□ -1.03
LCA10Q71F78 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC8.59□□□□□ -1.03
LCA10Q71F78 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC8.59□□□□□ -1.03
LCA10Q71F78 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC8.59□□□□□ -1.03
LCA10Q71F78 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC8.59□□□□□ -1.03
LCA10Q71F78 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
LCA10Q71F78 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
LCA10Q71F78 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC8.59□□□□□ -1.03
LCA10Q71F78 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC8.59□□□□□ -1.03
LCA10Q71F78 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
LCA10Q71F78 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
LCA10Q71F78 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
LCA10Q71F78 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
LCA10Q71F78 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
LCA10Q71F78 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LCA10Q71F78 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
LCA10Q71F78 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
LCA10Q71F78 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC8.59□□□□□ -1.04
LCA10Q71F78 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
LCA10Q71F78 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
LCA10Q71F78 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LCA10Q71F78 AMT-204ENST00000427987 1646 ntTSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
LCA10Q71F78 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 AC136621.1-201ENST00000624017 2304 ntBASIC8.58□□□□□ -1.04
LCA10Q71F78 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 COPE-203ENST00000351079 907 ntTSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 COX5BP2-201ENST00000392354 334 ntBASIC8.58□□□□□ -1.04
LCA10Q71F78 SLC25A1P3-201ENST00000395415 828 ntBASIC8.58□□□□□ -1.04
LCA10Q71F78 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 SAPCD2P2-201ENST00000431719 1174 ntBASIC8.58□□□□□ -1.04
LCA10Q71F78 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC8.58□□□□□ -1.04
LCA10Q71F78 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 AC010203.1-204ENST00000548782 407 ntBASIC8.58□□□□□ -1.04
LCA10Q71F78 NAA38-203ENST00000575071 553 ntTSL 2 BASIC8.58□□□□□ -1.04
LCA10Q71F78 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC8.58□□□□□ -1.04
LCA10Q71F78 AC134407.3-201ENST00000624035 2139 ntBASIC8.58□□□□□ -1.04
LCA10Q71F78 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LCA10Q71F78 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LCA10Q71F78 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LCA10Q71F78 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms