Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 AP002414.1-201ENST00000391405 1147 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 BX005266.1-201ENST00000473402 457 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 POLD2P1-201ENST00000511220 997 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 RNA5SP416-201ENST00000516838 111 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 AC040169.1-201ENST00000565382 521 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 LINC01144-201ENST00000626198 1710 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 AC004817.3-201ENST00000602957 2129 ntBASIC13.87□□□□□ -0.19
C11orf88Q6PI97 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 AC148477.5-201ENST00000625164 1645 ntBASIC13.86□□□□□ -0.19
C11orf88Q6PI97 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 AL671710.1-201ENST00000610245 2349 ntBASIC13.86□□□□□ -0.19
C11orf88Q6PI97 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 DUX4L17-201ENST00000557360 1267 ntBASIC13.86□□□□□ -0.19
C11orf88Q6PI97 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms