Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 LINC01101-201ENST00000622953 1884 ntBASIC16.34■□□□□ 0.21
LRRC38Q5VT99 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 CNN2P11-201ENST00000429351 262 ntBASIC16.34■□□□□ 0.21
LRRC38Q5VT99 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 SLED1-202ENST00000512051 380 ntBASIC16.34■□□□□ 0.21
LRRC38Q5VT99 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 AC069262.1-201ENST00000539058 672 ntBASIC16.34■□□□□ 0.21
LRRC38Q5VT99 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 AL033527.5-202ENST00000641632 1098 ntBASIC16.34■□□□□ 0.21
LRRC38Q5VT99 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC38Q5VT99 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.33■□□□□ 0.21
LRRC38Q5VT99 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LRRC38Q5VT99 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC38Q5VT99 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.33■□□□□ 0.21
LRRC38Q5VT99 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LRRC38Q5VT99 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC38Q5VT99 MST1L-201ENST00000442552 2185 ntBASIC16.33■□□□□ 0.2
LRRC38Q5VT99 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 HLA-V-204ENST00000476601 1289 ntBASIC16.33■□□□□ 0.2
LRRC38Q5VT99 HLA-J-203ENST00000494367 1087 ntBASIC16.33■□□□□ 0.2
LRRC38Q5VT99 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AC025048.3-201ENST00000590609 569 ntBASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AC005702.4-201ENST00000618393 416 ntBASIC16.33■□□□□ 0.2
LRRC38Q5VT99 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.33■□□□□ 0.2
LRRC38Q5VT99 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC38Q5VT99 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms