Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LHX2P50458 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LHX2P50458 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LHX2P50458 MST1L-201ENST00000442552 2185 ntBASIC14.02□□□□□ -0.17
LHX2P50458 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
LHX2P50458 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 KRT8P22-201ENST00000562317 1415 ntBASIC14.01□□□□□ -0.17
LHX2P50458 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 AL162726.2-201ENST00000438986 1017 ntBASIC14.01□□□□□ -0.17
LHX2P50458 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.01□□□□□ -0.17
LHX2P50458 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.01□□□□□ -0.17
LHX2P50458 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 AC120045.2-201ENST00000567334 178 ntBASIC14.01□□□□□ -0.17
LHX2P50458 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
LHX2P50458 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX2P50458 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LHX2P50458 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14□□□□□ -0.17
LHX2P50458 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LHX2P50458 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14□□□□□ -0.17
LHX2P50458 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14□□□□□ -0.17
LHX2P50458 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14□□□□□ -0.17
LHX2P50458 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LHX2P50458 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LHX2P50458 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14□□□□□ -0.17
LHX2P50458 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14□□□□□ -0.17
LHX2P50458 AC127383.1-201ENST00000444697 1800 ntBASIC14□□□□□ -0.17
LHX2P50458 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LHX2P50458 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 TTTY23B-201ENST00000442790 549 ntBASIC14□□□□□ -0.17
LHX2P50458 AC007389.4-201ENST00000454674 793 ntBASIC14□□□□□ -0.17
LHX2P50458 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14□□□□□ -0.17
LHX2P50458 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 AC026410.3-201ENST00000514280 936 ntBASIC14□□□□□ -0.17
LHX2P50458 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14□□□□□ -0.17
LHX2P50458 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14□□□□□ -0.17
LHX2P50458 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LHX2P50458 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14□□□□□ -0.17
LHX2P50458 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14□□□□□ -0.17
LHX2P50458 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14□□□□□ -0.17
LHX2P50458 RPSAP52-203ENST00000622976 1023 ntBASIC14□□□□□ -0.17
LHX2P50458 CU634019.7-201ENST00000624153 1185 ntBASIC14□□□□□ -0.17
LHX2P50458 FP236241.2-201ENST00000624906 1185 ntBASIC14□□□□□ -0.17
LHX2P50458 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14□□□□□ -0.17
LHX2P50458 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LHX2P50458 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14□□□□□ -0.17
LHX2P50458 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LHX2P50458 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LHX2P50458 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LHX2P50458 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX2P50458 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms