Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.93□□□□□ -0.02
CLK1P49759 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 AC023908.3-201ENST00000564211 3047 ntBASIC14.92□□□□□ -0.02
CLK1P49759 AC106881.1-201ENST00000605849 3329 ntBASIC14.92□□□□□ -0.02
CLK1P49759 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 AC023274.1-201ENST00000418278 595 ntBASIC14.92□□□□□ -0.02
CLK1P49759 MKNK2P1-201ENST00000437526 628 ntBASIC14.92□□□□□ -0.02
CLK1P49759 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.92□□□□□ -0.02
CLK1P49759 DNAJB3-201ENST00000446806 729 ntBASIC14.92□□□□□ -0.02
CLK1P49759 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.92□□□□□ -0.02
CLK1P49759 AL671883.3-201ENST00000603274 991 ntBASIC14.92□□□□□ -0.02
CLK1P49759 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.92□□□□□ -0.02
CLK1P49759 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.92□□□□□ -0.02
CLK1P49759 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 AP003680.1-201ENST00000598970 3660 ntBASIC14.92□□□□□ -0.02
CLK1P49759 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLK1P49759 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
CLK1P49759 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 WASH6P-202ENST00000359512 1437 ntBASIC14.92□□□□□ -0.02
CLK1P49759 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.92□□□□□ -0.02
CLK1P49759 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLK1P49759 AKAP8P1-201ENST00000434743 1349 ntBASIC14.92□□□□□ -0.02
CLK1P49759 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.91□□□□□ -0.02
CLK1P49759 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLK1P49759 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.91□□□□□ -0.02
CLK1P49759 AL078644.1-201ENST00000609881 752 ntBASIC14.91□□□□□ -0.02
CLK1P49759 C20orf181-201ENST00000623918 480 ntBASIC14.91□□□□□ -0.02
CLK1P49759 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLK1P49759 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLK1P49759 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLK1P49759 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CLK1P49759 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLK1P49759 AC136621.1-201ENST00000624017 2304 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms