Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.48■□□□□ 0.55
NEDD4P46934 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.48■□□□□ 0.55
NEDD4P46934 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.48■□□□□ 0.55
NEDD4P46934 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.48■□□□□ 0.55
NEDD4P46934 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NEDD4P46934 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.48■□□□□ 0.55
NEDD4P46934 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.48■□□□□ 0.55
NEDD4P46934 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.48■□□□□ 0.55
NEDD4P46934 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.48■□□□□ 0.55
NEDD4P46934 AC036164.1-201ENST00000570544 333 ntBASIC18.48■□□□□ 0.55
NEDD4P46934 AC008494.3-201ENST00000606615 944 ntBASIC18.48■□□□□ 0.55
NEDD4P46934 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NEDD4P46934 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEDD4P46934 HYMAI-201ENST00000635591 3347 ntBASIC18.48■□□□□ 0.55
NEDD4P46934 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NEDD4P46934 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.47■□□□□ 0.55
NEDD4P46934 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.47■□□□□ 0.55
NEDD4P46934 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.47■□□□□ 0.55
NEDD4P46934 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NEDD4P46934 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
NEDD4P46934 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.47■□□□□ 0.55
NEDD4P46934 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.47■□□□□ 0.55
NEDD4P46934 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.47■□□□□ 0.55
NEDD4P46934 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
NEDD4P46934 AC123567.1-201ENST00000548294 1261 ntBASIC18.47■□□□□ 0.55
NEDD4P46934 AC140912.1-201ENST00000577171 1054 ntBASIC18.47■□□□□ 0.55
NEDD4P46934 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 AL662799.1-202ENST00000614205 422 ntBASIC18.47■□□□□ 0.55
NEDD4P46934 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEDD4P46934 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.47■□□□□ 0.55
NEDD4P46934 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
NEDD4P46934 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NEDD4P46934 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 SSR4P1-203ENST00000599569 2260 ntBASIC18.46■□□□□ 0.55
NEDD4P46934 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.46■□□□□ 0.55
NEDD4P46934 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
NEDD4P46934 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.46■□□□□ 0.55
NEDD4P46934 AL353779.1-201ENST00000434793 351 ntBASIC18.46■□□□□ 0.55
NEDD4P46934 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.46■□□□□ 0.55
NEDD4P46934 RN7SL399P-201ENST00000471648 279 ntBASIC18.46■□□□□ 0.55
NEDD4P46934 FAM86LP-201ENST00000478302 853 ntBASIC18.46■□□□□ 0.55
NEDD4P46934 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEDD4P46934 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.46■□□□□ 0.55
NEDD4P46934 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.46■□□□□ 0.55
NEDD4P46934 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.46■□□□□ 0.55
NEDD4P46934 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
NEDD4P46934 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NEDD4P46934 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.45■□□□□ 0.54
NEDD4P46934 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEDD4P46934 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.45■□□□□ 0.54
NEDD4P46934 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
NEDD4P46934 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEDD4P46934 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NEDD4P46934 AC084364.1-201ENST00000551967 1556 ntBASIC18.45■□□□□ 0.54
NEDD4P46934 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.45■□□□□ 0.54
NEDD4P46934 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms