Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.05□□□□□ -0.16
CD40LGP29965 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.05□□□□□ -0.16
CD40LGP29965 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.05□□□□□ -0.16
CD40LGP29965 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CD40LGP29965 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 Z69720.1-201ENST00000601483 472 ntBASIC14.05□□□□□ -0.16
CD40LGP29965 AC073592.5-201ENST00000624854 528 ntBASIC14.05□□□□□ -0.16
CD40LGP29965 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.05□□□□□ -0.16
CD40LGP29965 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40LGP29965 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40LGP29965 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.04□□□□□ -0.16
CD40LGP29965 AC097359.2-201ENST00000604992 2389 ntBASIC14.04□□□□□ -0.16
CD40LGP29965 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CD40LGP29965 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.04□□□□□ -0.16
CD40LGP29965 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.04□□□□□ -0.16
CD40LGP29965 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD40LGP29965 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.04□□□□□ -0.16
CD40LGP29965 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40LGP29965 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CD40LGP29965 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40LGP29965 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms