Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 AC013268.4-201ENST00000637413 2228 ntBASIC14.3□□□□□ -0.12
FREM3P0C091 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 CICP13-201ENST00000422015 2789 ntBASIC14.3□□□□□ -0.12
FREM3P0C091 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FREM3P0C091 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 AL133267.1-201ENST00000398220 340 ntBASIC14.3□□□□□ -0.12
FREM3P0C091 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.3□□□□□ -0.12
FREM3P0C091 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.3□□□□□ -0.12
FREM3P0C091 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.3□□□□□ -0.12
FREM3P0C091 RARRES2P5-201ENST00000564013 466 ntBASIC14.3□□□□□ -0.12
FREM3P0C091 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.3□□□□□ -0.12
FREM3P0C091 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.3□□□□□ -0.12
FREM3P0C091 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FREM3P0C091 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FREM3P0C091 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.3□□□□□ -0.12
FREM3P0C091 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.3□□□□□ -0.12
FREM3P0C091 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
FREM3P0C091 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
FREM3P0C091 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.29□□□□□ -0.12
FREM3P0C091 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 AC079776.1-201ENST00000401540 1152 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 AC005034.1-201ENST00000426657 489 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.29□□□□□ -0.12
FREM3P0C091 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.29□□□□□ -0.12
FREM3P0C091 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.29□□□□□ -0.12
FREM3P0C091 AC099568.2-201ENST00000609194 695 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.29□□□□□ -0.12
FREM3P0C091 AL358472.5-202ENST00000641448 1267 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 AC092127.1-201ENST00000567093 3455 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.29□□□□□ -0.12
FREM3P0C091 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.29□□□□□ -0.12
FREM3P0C091 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 GIMAP3P-201ENST00000495150 836 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.29□□□□□ -0.12
FREM3P0C091 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 AC123567.1-201ENST00000548294 1261 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 SNX29P1-201ENST00000548357 1007 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.29□□□□□ -0.12
FREM3P0C091 AC010319.3-201ENST00000597028 470 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
FREM3P0C091 AL158212.4-201ENST00000624062 1286 ntBASIC14.29□□□□□ -0.12
FREM3P0C091 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.29□□□□□ -0.12
FREM3P0C091 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FREM3P0C091 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.29□□□□□ -0.12
FREM3P0C091 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 PKD1P5-201ENST00000532415 10291 ntBASIC14.28□□□□□ -0.12
FREM3P0C091 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 AC073347.1-201ENST00000421633 2643 ntBASIC14.28□□□□□ -0.12
FREM3P0C091 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
FREM3P0C091 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 AL121723.1-201ENST00000445194 1519 ntBASIC14.28□□□□□ -0.12
FREM3P0C091 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.28□□□□□ -0.12
FREM3P0C091 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms