Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
CAPN1P07384 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 AC136621.1-201ENST00000624017 2304 ntBASIC15.6■□□□□ 0.09
CAPN1P07384 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.59■□□□□ 0.09
CAPN1P07384 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CAPN1P07384 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 AC020658.6-201ENST00000623564 1870 ntBASIC15.59■□□□□ 0.09
CAPN1P07384 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.59■□□□□ 0.09
CAPN1P07384 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.59■□□□□ 0.09
CAPN1P07384 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.59■□□□□ 0.09
CAPN1P07384 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 AC097493.3-201ENST00000509725 367 ntBASIC15.59■□□□□ 0.09
CAPN1P07384 MIR4453-201ENST00000584019 89 ntBASIC15.59■□□□□ 0.09
CAPN1P07384 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 AL158211.3-201ENST00000607385 239 ntBASIC15.59■□□□□ 0.09
CAPN1P07384 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.59■□□□□ 0.09
CAPN1P07384 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.59■□□□□ 0.09
CAPN1P07384 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CAPN1P07384 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CAPN1P07384 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CAPN1P07384 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CAPN1P07384 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.58■□□□□ 0.09
CAPN1P07384 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CAPN1P07384 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CAPN1P07384 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CAPN1P07384 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CAPN1P07384 AP002414.2-201ENST00000591780 3365 ntBASIC15.58■□□□□ 0.09
CAPN1P07384 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.58■□□□□ 0.09
CAPN1P07384 AP3S2-216ENST00000617003 1561 ntBASIC15.58■□□□□ 0.09
CAPN1P07384 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CAPN1P07384 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CAPN1P07384 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPN1P07384 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CAPN1P07384 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.58■□□□□ 0.08
CAPN1P07384 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CAPN1P07384 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.58■□□□□ 0.08
CAPN1P07384 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.58■□□□□ 0.08
CAPN1P07384 BASP1P1-201ENST00000430708 665 ntBASIC15.58■□□□□ 0.08
CAPN1P07384 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPN1P07384 AC098859.1-201ENST00000502915 1238 ntBASIC15.58■□□□□ 0.08
CAPN1P07384 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.58■□□□□ 0.08
CAPN1P07384 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPN1P07384 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.58■□□□□ 0.08
CAPN1P07384 SPTSSB-204ENST00000617024 1292 ntBASIC15.58■□□□□ 0.08
CAPN1P07384 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPN1P07384 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CAPN1P07384 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.58■□□□□ 0.08
CAPN1P07384 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPN1P07384 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.58■□□□□ 0.08
CAPN1P07384 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CAPN1P07384 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPN1P07384 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPN1P07384 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms