Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMNAP02545 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMNAP02545 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.57■□□□□ 0.24
LMNAP02545 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 AC126755.1-201ENST00000525846 6405 ntBASIC16.57■□□□□ 0.24
LMNAP02545 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMNAP02545 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMNAP02545 AC067930.6-201ENST00000623257 4947 ntBASIC16.57■□□□□ 0.24
LMNAP02545 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LMNAP02545 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMNAP02545 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
LMNAP02545 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.56■□□□□ 0.24
LMNAP02545 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.56■□□□□ 0.24
LMNAP02545 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.56■□□□□ 0.24
LMNAP02545 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LMNAP02545 HLA-H-201ENST00000383620 1096 ntBASIC16.56■□□□□ 0.24
LMNAP02545 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.56■□□□□ 0.24
LMNAP02545 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LMNAP02545 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.56■□□□□ 0.24
LMNAP02545 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.56■□□□□ 0.24
LMNAP02545 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.56■□□□□ 0.24
LMNAP02545 RN7SL828P-201ENST00000607615 303 ntBASIC16.56■□□□□ 0.24
LMNAP02545 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.56■□□□□ 0.24
LMNAP02545 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.56■□□□□ 0.24
LMNAP02545 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 AC007326.2-201ENST00000624224 7579 ntBASIC16.56■□□□□ 0.24
LMNAP02545 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.56■□□□□ 0.24
LMNAP02545 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.56■□□□□ 0.24
LMNAP02545 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.56■□□□□ 0.24
LMNAP02545 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMNAP02545 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LMNAP02545 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.55■□□□□ 0.24
LMNAP02545 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LMNAP02545 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.55■□□□□ 0.24
LMNAP02545 TMEM14DP-201ENST00000422205 345 ntBASIC16.55■□□□□ 0.24
LMNAP02545 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.55■□□□□ 0.24
LMNAP02545 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.55■□□□□ 0.24
LMNAP02545 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.55■□□□□ 0.24
LMNAP02545 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.55■□□□□ 0.24
LMNAP02545 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LMNAP02545 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.55■□□□□ 0.24
LMNAP02545 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.55■□□□□ 0.24
LMNAP02545 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LMNAP02545 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.55■□□□□ 0.24
LMNAP02545 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.55■□□□□ 0.24
LMNAP02545 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMNAP02545 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.54■□□□□ 0.24
LMNAP02545 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMNAP02545 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMNAP02545 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.54■□□□□ 0.24
LMNAP02545 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMNAP02545 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms