Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 OR6D1P-203ENST00000641209 4860 ntBASIC17.72■□□□□ 0.43
ALDH1A1P00352 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 NPM1P43-201ENST00000558669 786 ntBASIC17.72■□□□□ 0.43
ALDH1A1P00352 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 AC020922.3-201ENST00000595064 547 ntBASIC17.72■□□□□ 0.43
ALDH1A1P00352 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 AL603764.1-201ENST00000636452 321 ntBASIC17.72■□□□□ 0.43
ALDH1A1P00352 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 PP12613-201ENST00000424958 2230 ntBASIC17.72■□□□□ 0.43
ALDH1A1P00352 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALDH1A1P00352 KRT8P14-201ENST00000414254 1442 ntBASIC17.72■□□□□ 0.43
ALDH1A1P00352 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.72■□□□□ 0.43
ALDH1A1P00352 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 RN7SL181P-201ENST00000462921 277 ntBASIC17.71■□□□□ 0.43
ALDH1A1P00352 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 AC025181.2-201ENST00000606994 802 ntBASIC17.71■□□□□ 0.43
ALDH1A1P00352 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALDH1A1P00352 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ALDH1A1P00352 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALDH1A1P00352 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALDH1A1P00352 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 POM121L8P-201ENST00000417732 1281 ntBASIC17.7■□□□□ 0.42
ALDH1A1P00352 POM121L9P-203ENST00000441984 1285 ntBASIC17.7■□□□□ 0.42
ALDH1A1P00352 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 RN7SL8P-201ENST00000461771 266 ntBASIC17.7■□□□□ 0.42
ALDH1A1P00352 AL391280.1-201ENST00000506969 1062 ntBASIC17.7■□□□□ 0.42
ALDH1A1P00352 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms