Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
GPC4O75487 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
GPC4O75487 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC4O75487 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
GPC4O75487 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC4O75487 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GPC4O75487 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GPC4O75487 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
GPC4O75487 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC4O75487 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 HAUS4P1-201ENST00000406739 1145 ntBASIC15.88■□□□□ 0.13
GPC4O75487 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC4O75487 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.88■□□□□ 0.13
GPC4O75487 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.88■□□□□ 0.13
GPC4O75487 AL512356.2-201ENST00000546955 174 ntBASIC15.88■□□□□ 0.13
GPC4O75487 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.88■□□□□ 0.13
GPC4O75487 AC026150.2-201ENST00000564693 1156 ntBASIC15.88■□□□□ 0.13
GPC4O75487 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.88■□□□□ 0.13
GPC4O75487 AC006538.3-201ENST00000612495 578 ntBASIC15.88■□□□□ 0.13
GPC4O75487 AP001059.3-201ENST00000619053 235 ntBASIC15.88■□□□□ 0.13
GPC4O75487 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GPC4O75487 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC4O75487 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC4O75487 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
GPC4O75487 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC4O75487 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.87■□□□□ 0.13
GPC4O75487 AL136379.1-201ENST00000623471 2642 ntBASIC15.87■□□□□ 0.13
GPC4O75487 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
GPC4O75487 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.87■□□□□ 0.13
GPC4O75487 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.87■□□□□ 0.13
GPC4O75487 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
GPC4O75487 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.87■□□□□ 0.13
GPC4O75487 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.87■□□□□ 0.13
GPC4O75487 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
GPC4O75487 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.87■□□□□ 0.13
GPC4O75487 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.87■□□□□ 0.13
GPC4O75487 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms