Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AC093813.1-201ENST00000605066 256 ntBASIC16.19■□□□□ 0.18
COCHO43405 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 MIR6805-201ENST00000615055 62 ntBASIC16.19■□□□□ 0.18
COCHO43405 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
COCHO43405 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COCHO43405 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COCHO43405 MSTO2P-201ENST00000314835 1709 ntBASIC16.19■□□□□ 0.18
COCHO43405 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
COCHO43405 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COCHO43405 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.18■□□□□ 0.18
COCHO43405 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COCHO43405 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.18■□□□□ 0.18
COCHO43405 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
COCHO43405 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 MIR658-201ENST00000385210 100 ntBASIC16.18■□□□□ 0.18
COCHO43405 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 PTP4A1P2-201ENST00000546033 454 ntBASIC16.18■□□□□ 0.18
COCHO43405 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.18■□□□□ 0.18
COCHO43405 AP001063.1-201ENST00000568332 529 ntBASIC16.18■□□□□ 0.18
COCHO43405 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.18■□□□□ 0.18
COCHO43405 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.18■□□□□ 0.18
COCHO43405 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 PCDHA1-201ENST00000378133 2726 ntBASIC16.18■□□□□ 0.18
COCHO43405 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 DOC2GP-204ENST00000639052 2548 ntBASIC16.18■□□□□ 0.18
COCHO43405 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.18■□□□□ 0.18
COCHO43405 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COCHO43405 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COCHO43405 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 AC127383.1-201ENST00000444697 1800 ntBASIC16.17■□□□□ 0.18
COCHO43405 AC092127.1-201ENST00000567093 3455 ntBASIC16.17■□□□□ 0.18
COCHO43405 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
COCHO43405 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
COCHO43405 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
COCHO43405 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 KRT43P-201ENST00000434019 910 ntBASIC16.17■□□□□ 0.18
COCHO43405 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 AC093433.1-201ENST00000458048 571 ntBASIC16.17■□□□□ 0.18
COCHO43405 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 AP001889.1-201ENST00000525414 633 ntBASIC16.17■□□□□ 0.18
COCHO43405 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 SNX29P1-201ENST00000548357 1007 ntBASIC16.17■□□□□ 0.18
COCHO43405 AC009486.1-201ENST00000569860 813 ntBASIC16.17■□□□□ 0.18
COCHO43405 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.17■□□□□ 0.18
COCHO43405 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COCHO43405 MIR6752-201ENST00000618442 71 ntBASIC16.17■□□□□ 0.18
COCHO43405 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.17■□□□□ 0.18
COCHO43405 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 PRAL-201ENST00000624952 3286 ntBASIC16.17■□□□□ 0.18
COCHO43405 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.17■□□□□ 0.18
COCHO43405 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COCHO43405 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms