Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 AC023024.2-201ENST00000623561 1993 ntBASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 AJ011931.1-201ENST00000618749 2492 ntBASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 OR7E14P-202ENST00000530490 1290 ntBASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 AL645728.2-201ENST00000641974 660 ntBASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV18A0A075B6X5 AC104581.4-201ENST00000623126 3052 ntBASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 AC117489.1-201ENST00000625169 3217 ntBASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 GPX1P2-201ENST00000429271 606 ntBASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 AL513480.1-201ENST00000451731 511 ntBASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 CXCL1P1-201ENST00000502804 216 ntBASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV18A0A075B6X5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms