Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HS3ST3A1Q9Y663 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 AC132938.4-201ENST00000623835 848 ntBASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 RHOXF1P1-202ENST00000635473 501 ntBASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HS3ST3A1Q9Y663 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 CNN2P8-201ENST00000421872 913 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 FAM21FP-201ENST00000426241 1131 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AC114812.1-204ENST00000449669 728 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AC025279.2-201ENST00000569730 653 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 GNRHR2-203ENST00000581100 1187 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AC244669.2-201ENST00000612320 853 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 AL603832.2-201ENST00000566195 2125 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 REXO1L6P-201ENST00000603433 1515 ntBASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.32■□□□□ 0.04
HS3ST3A1Q9Y663 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HS3ST3A1Q9Y663 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms