Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DKK4Q9UBT3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DKK4Q9UBT3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DKK4Q9UBT3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DKK4Q9UBT3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
DKK4Q9UBT3 HCG11-201ENST00000411553 5696 ntBASIC14.46□□□□□ -0.1
DKK4Q9UBT3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
DKK4Q9UBT3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
DKK4Q9UBT3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
DKK4Q9UBT3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DKK4Q9UBT3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
DKK4Q9UBT3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
DKK4Q9UBT3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
DKK4Q9UBT3 AL157791.1-201ENST00000553667 1699 ntBASIC14.46□□□□□ -0.1
DKK4Q9UBT3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 AC148477.4-201ENST00000613430 1793 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 AL136309.1-201ENST00000403917 691 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 FGFR3P1-201ENST00000449999 601 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 AC100850.1-201ENST00000506768 649 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 AC242376.1-201ENST00000559033 726 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 AC103988.2-201ENST00000561804 725 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 DNM1P30-201ENST00000563586 452 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 AC005357.2-202ENST00000590507 1060 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 LRRC59-203ENST00000576448 1531 ntBASIC14.45□□□□□ -0.1
DKK4Q9UBT3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
DKK4Q9UBT3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AC012313.1-201ENST00000593393 3059 ntBASIC14.44□□□□□ -0.1
DKK4Q9UBT3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AC009053.2-201ENST00000563701 2365 ntBASIC14.44□□□□□ -0.1
DKK4Q9UBT3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AC125604.1-201ENST00000496255 707 ntBASIC14.44□□□□□ -0.1
DKK4Q9UBT3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AC132192.2-201ENST00000596206 1147 ntBASIC14.44□□□□□ -0.1
DKK4Q9UBT3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AP001065.2-201ENST00000617205 644 ntBASIC14.44□□□□□ -0.1
DKK4Q9UBT3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AL603764.1-201ENST00000636452 321 ntBASIC14.44□□□□□ -0.1
DKK4Q9UBT3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DKK4Q9UBT3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms