Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 KRT8P37-201ENST00000451609 1420 ntBASIC13.55□□□□□ -0.24
GCM1Q9NP62 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.54□□□□□ -0.24
GCM1Q9NP62 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.54□□□□□ -0.24
GCM1Q9NP62 SERBP1P3-201ENST00000459980 809 ntBASIC13.54□□□□□ -0.24
GCM1Q9NP62 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.54□□□□□ -0.24
GCM1Q9NP62 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GCM1Q9NP62 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 CDC14C-201ENST00000428251 1719 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 AC069224.1-201ENST00000566372 1715 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 AL391005.1-201ENST00000623953 2435 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 FO393414.2-201ENST00000405153 598 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 EEF1DP4-201ENST00000446006 880 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 AL512638.1-201ENST00000457493 794 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 LINC02447-202ENST00000501888 2146 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 AL603832.2-201ENST00000566195 2125 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 AC087499.5-201ENST00000452760 1342 ntBASIC13.53□□□□□ -0.24
GCM1Q9NP62 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GCM1Q9NP62 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.53□□□□□ -0.24
GCM1Q9NP62 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms