Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 HLA-H-201ENST00000383620 1096 ntBASIC16.68■□□□□ 0.26
CD248Q9HCU0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 AC009477.1-201ENST00000452936 217 ntBASIC16.68■□□□□ 0.26
CD248Q9HCU0 AP005018.1-201ENST00000525475 301 ntBASIC16.68■□□□□ 0.26
CD248Q9HCU0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 SPDYE22P-201ENST00000582158 798 ntBASIC16.68■□□□□ 0.26
CD248Q9HCU0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 AC007686.3-201ENST00000619017 3487 ntBASIC16.68■□□□□ 0.26
CD248Q9HCU0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.68■□□□□ 0.26
CD248Q9HCU0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD248Q9HCU0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 CICP24-201ENST00000605464 2705 ntBASIC16.67■□□□□ 0.26
CD248Q9HCU0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 AC005034.1-201ENST00000426657 489 ntBASIC16.67■□□□□ 0.26
CD248Q9HCU0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 AC003101.2-201ENST00000612557 442 ntBASIC16.67■□□□□ 0.26
CD248Q9HCU0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CD248Q9HCU0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD248Q9HCU0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 AC005089.1-201ENST00000619486 2241 ntBASIC16.66■□□□□ 0.26
CD248Q9HCU0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.66■□□□□ 0.26
CD248Q9HCU0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms