Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AC127383.1-201ENST00000444697 1800 ntBASIC19.44■□□□□ 0.7
UPF2Q9HAU5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.44■□□□□ 0.7
UPF2Q9HAU5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AC092474.2-201ENST00000424288 719 ntBASIC19.44■□□□□ 0.7
UPF2Q9HAU5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 KRT18P35-201ENST00000510488 1269 ntBASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 AC005089.1-201ENST00000619486 2241 ntBASIC19.44■□□□□ 0.7
UPF2Q9HAU5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPF2Q9HAU5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AC148477.4-201ENST00000613430 1793 ntBASIC19.43■□□□□ 0.7
UPF2Q9HAU5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.43■□□□□ 0.7
UPF2Q9HAU5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 UPK3BP1-201ENST00000428678 509 ntBASIC19.43■□□□□ 0.7
UPF2Q9HAU5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AC108751.1-201ENST00000490852 363 ntBASIC19.43■□□□□ 0.7
UPF2Q9HAU5 PRYP6-201ENST00000514804 343 ntBASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms