Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 MAGEA5-201ENST00000446757 942 ntBASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 VDAC1P7-201ENST00000462417 847 ntBASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 AC026740.1-201ENST00000607068 791 ntBASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 CU633904.3-201ENST00000624042 1029 ntBASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 FTLP1-201ENST00000449155 526 ntBASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 AC097724.1-201ENST00000609581 426 ntBASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 AC091812.3-201ENST00000621362 345 ntBASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2OQ9C0C9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 AL133466.1-201ENST00000447582 150 ntBASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 HOMER2P2-201ENST00000451621 847 ntBASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 RN7SL720P-201ENST00000488178 304 ntBASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2OQ9C0C9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms