Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 SPDYE15P-201ENST00000424157 909 ntBASIC12.86□□□□□ -0.35
NKX6-2Q9C056 SIGLEC30P-201ENST00000455569 941 ntBASIC12.86□□□□□ -0.35
NKX6-2Q9C056 AC008550.1-201ENST00000511500 884 ntBASIC12.86□□□□□ -0.35
NKX6-2Q9C056 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 Z83836.1-201ENST00000624605 1642 ntBASIC12.86□□□□□ -0.35
NKX6-2Q9C056 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 AC015909.5-201ENST00000624336 2266 ntBASIC12.86□□□□□ -0.35
NKX6-2Q9C056 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CICP16-201ENST00000502609 2813 ntBASIC12.85□□□□□ -0.35
NKX6-2Q9C056 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 LINC01144-201ENST00000626198 1710 ntBASIC12.85□□□□□ -0.35
NKX6-2Q9C056 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 HBZP1-201ENST00000354915 429 ntBASIC12.85□□□□□ -0.35
NKX6-2Q9C056 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 AC011840.4-201ENST00000578471 627 ntBASIC12.85□□□□□ -0.35
NKX6-2Q9C056 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NKX6-2Q9C056 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX6-2Q9C056 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms