Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 AL035633.1-201ENST00000406139 838 ntBASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 AZGP1P1-201ENST00000411909 902 ntBASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 PHKG1P2-201ENST00000457537 863 ntBASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 AC254562.1-201ENST00000417586 456 ntBASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 HLA-J-203ENST00000494367 1087 ntBASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 AC097359.3-201ENST00000603982 1210 ntBASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF3BQ9BZI7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 MIR770-201ENST00000390219 98 ntBASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms