Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 MIR940-201ENST00000401276 94 ntBASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 FAM197Y3-203ENST00000618346 717 ntBASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 C18orf15-201ENST00000623680 2534 ntBASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD3Q9BV44 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AC091951.1-201ENST00000512854 2465 ntBASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 GPX1P2-201ENST00000429271 606 ntBASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 PRYP6-201ENST00000514804 343 ntBASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AC112693.3-201ENST00000624819 1983 ntBASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
THUMPD3Q9BV44 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms