Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 BTBD7P1-201ENST00000447253 1453 ntBASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CICP14-201ENST00000629111 2732 ntBASIC11.06□□□□□ -0.64
UPK3BQ9BT76 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 RPL37AP1-201ENST00000412502 279 ntBASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AC009477.1-201ENST00000452936 217 ntBASIC11.06□□□□□ -0.64
UPK3BQ9BT76 RN7SL618P-201ENST00000477850 296 ntBASIC11.06□□□□□ -0.64
UPK3BQ9BT76 TERF1P3-201ENST00000505638 1227 ntBASIC11.06□□□□□ -0.64
UPK3BQ9BT76 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ME2P1-201ENST00000426028 1970 ntBASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UPK3BQ9BT76 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms